LINC00189

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LINC00189 RNA expression is significantly associated with the protein abundance of many other proteins, with 9,121 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible LINC00189-associated proteins across cancer lineages are CD163, CTNNA1, and FAP. Each is linked with LINC00189 in more than 4 cancer types. Because this analysis shows association rather than direction, both LINC00189-to-partner and partner-to-LINC00189 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00189→partner) and Y-score (partner→LINC00189) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCCD163 →+0.470+0.321.001.00834
COADCTNNA1 →-0.309-0.234<.001<.00134
OVFAP →+1.240+0.329<.001<.00134
OVFERMT2 →+0.587+0.325<.001<.00134
COADHK3 →+0.558+0.204<.001.00134
LSCCHSPD1 →-0.513-0.403<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,121 associations by consensus.

Exploration