LINC00159

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, LINC00159 RNA differs between tumor and matched normal tissue in 6 of 18 cancer types tested, making tumor–normal expression one of LINC00159’s most consistent transcriptional readouts.

The strongest signal is observed in colon adenocarcinoma (COAD), where LINC00159 RNA is repressed in tumor relative to normal tissue. In most cancer types LINC00159 is over-expressed in tumor, although a few such as COAD and STAD show the opposite, repressed pattern.

COAD, THCA, and UCEC are the cancer types where LINC00159 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in LINC00159 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
COADAllIII,IV−0.089<.0014view →
THCAAllIV+0.255.0292view →
UCECAllAll+0.231.0472view →
KIRCAllIII,IV+0.039.0342view →
STADAllAll−0.114.0241view →
THCAFemaleAll−0.077.0251view →
CHOLAllAll+0.063.0231view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 7 strongest of 6 lineages.

LINC00159–COAD

Tumor-vs-normal expression box plot for LINC00159 RNA in COAD.

Open the COAD breakdown →

Exploration