LIN9

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LIN9 RNA expression is significantly associated with the protein abundance of many other proteins, with 23,543 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible LIN9-associated proteins across cancer lineages are MKI67_S357, PAF1, and PARP1. Each is linked with LIN9 in more than 8 cancer types. Because this analysis shows association rather than direction, both LIN9-to-partner and partner-to-LIN9 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LIN9→partner) and Y-score (partner→LIN9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMKI67_S357 →+0.816+0.870<.001<.00139
GBMPAF1 →+0.356+0.703<.001<.00139
HNSCPARP1 →+0.479+0.754<.001<.00139
OVC1orf35 →+0.582+0.501<.001.00239
COADCACYBP →+0.467+0.661<.001<.00139
OVCDC73 →+0.291+0.604<.001.00139
Each partner links to its Q-omics profile. Showing the 6 strongest of 23,543 associations by consensus.

Exploration