LIN28AP1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LIN28AP1 RNA expression is significantly associated with the protein abundance of many other proteins, with 7,089 significant associations in total. GBM shows the largest number of these associations.

The most reproducible LIN28AP1-associated proteins across cancer lineages are U2SURP, ARID4B, and SF3B3. Each is linked with LIN28AP1 in more than 5 cancer types. Because this analysis shows association rather than direction, both LIN28AP1-to-partner and partner-to-LIN28AP1 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LIN28AP1→partner) and Y-score (partner→LIN28AP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCU2SURP →+0.246+0.745.002<.00126
HNSCARID4B →+0.258+0.682.001<.00135
GBMSF3B3 →+0.254+0.556.001<.00135
GBMHDAC2 →+0.382+0.638<.001<.00135
GBMCHERP →+0.278+0.608<.001<.00135
LUADPARP1 →+0.361+0.709<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,089 associations by consensus.

Exploration