LIN28AP1

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LIN28AP1 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,691 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LIN28AP1-associated GO terms across cancer lineages are Response to ionizing radiation, Peptidyl-lysine modification, and Regulation of DNA-templated transcription initiation. Each is linked with LIN28AP1 in more than 8 cancer types. Because this analysis shows association rather than direction, both LIN28AP1-to-partner and partner-to-LIN28AP1 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LIN28AP1→partner) and Y-score (partner→LIN28AP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STADResponse to ionizing radiation →+0.069+0.059<.001<.00139
STADPeptidyl-lysine modification →+0.066+0.062<.001<.00139
STADRegulation of DNA-templated transcription initiation →+0.074+0.059<.001<.00139
ESCAObsolete ubiquitin-dependent ERAD pathway →+0.082+0.192<.001<.00139
STADDNA integrity checkpoint signaling →+0.076+0.066<.001<.00139
STADRhythmic process →+0.050+0.063<.001<.00139
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,691 associations by consensus.

Exploration