LIMS2

Across TCGA patient cohorts, LIMS2 RNA expression is significantly associated with the protein abundance of many other proteins, with 21,472 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible LIMS2-associated proteins across cancer lineages are PALM, CNRIP1, and TPM1. Each is linked with LIMS2 in more than 9 cancer types. Because this analysis shows association rather than direction, both LIMS2-to-partner and partner-to-LIMS2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LIMS2 versus PALM in HNSC, with a Pearson correlation of 0.31.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LIMS2→partner) and Y-score (partner→LIMS2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
HNSC	PALM →	+0.687	+0.652	<.001	<.001	3	10
OV	CNRIP1 →	+0.666	+0.767	.001	.007	3	10
UCEC	TPM1 →	+0.759	+0.660	<.001	<.001	3	9
PDAC	PRELP →	+1.024	+0.403	<.001	.003	3	9
UCEC	ILK →	+0.571	+0.708	<.001	<.001	3	9
COAD	KANK2 →	+0.706	+1.037	<.001	<.001	3	9

Each partner links to its Q-omics profile. Showing the 6 strongest of 21,472 associations by consensus.

LIMS2 vs PALM — HNSC

Explore this scatter interactively →