LIMK1

mass-spec protein — tumor vs normal
Tumor vs Normalmass-specBox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, LIMK1 mass-spec protein differs between tumor and matched normal tissue in 6 of 18 cancer types tested, making tumor–normal expression one of LIMK1’s most consistent transcriptional readouts.

The strongest signal is observed in clear cell renal cell carcinoma (CCRCC), where LIMK1 mass-spec protein is more highly expressed in tumor relative to normal tissue. In most cancer types LIMK1 is over-expressed in tumor, although a few such as COAD show the opposite, repressed pattern.

CCRCC, HNSC, and LUAD are the cancer types where LIMK1 tumor–normal differential expression is most reproducible.

mass-spec protein tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in LIMK1 mass-spec protein (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
CCRCCAllIV+0.618<.00112view →
HNSCAllAll+0.441<.00111view →
LUADFemaleII,III,IV+0.492<.0018view →
COADAllAll−0.588.0055view →
PDACAllAll+0.377<.0015view →
LSCCAllAll+0.107<.0013view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 6 strongest of 6 lineages.

LIMK1–CCRCC

Tumor-vs-normal mass-spec protein box plot for LIMK1 in CCRCC.

Open the CCRCC breakdown →

Exploration