LIMK1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LIMK1 RNA expression is significantly associated with the protein abundance of many other proteins, with 14,050 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible LIMK1-associated proteins across cancer lineages are PLAU, CALU, and CRTAP. Each is linked with LIMK1 in more than 5 cancer types. Because this analysis shows association rather than direction, both LIMK1-to-partner and partner-to-LIMK1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LIMK1 versus PLAU in CCRCC, with a Pearson correlation of 0.51.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LIMK1→partner) and Y-score (partner→LIMK1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CCRCCPLAU →+1.069+1.028.001<.00136
CCRCCCALU →+0.476+0.642<.001.00135
BRCACRTAP →+0.645+0.641<.001<.00135
BRCAIKBIP →+0.518+0.627.001.00135
LSCCYWHAG →+0.304+0.564<.001<.00135
GBMZYX_S267 →+0.516+0.392<.001.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 14,050 associations by consensus.

LIMK1 vs PLAU — CCRCC

Per-sample scatter of LIMK1 vs PLAU in CCRCC (Pearson r = 0.51).

Explore this scatter interactively →

Exploration