LHFPL2

Across TCGA cell cohorts, LHFPL2 mutation is significantly associated with the RNA expression of many other genes, with 2 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible LHFPL2-associated genes across cancer lineages are MAGEB4 and SLC15A5. Each is linked with LHFPL2 in more than 1 cancer types. Because this analysis shows association rather than direction, both LHFPL2-to-partner and partner-to-LHFPL2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MAGEB4 grouped by LHFPL2-low versus LHFPL2-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LHFPL2→partner) and Y-score (partner→LHFPL2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LARGE_INTESTINE	MAGEB4 →	+0.012	+5.415	.009	.004	3	1
LARGE_INTESTINE	SLC15A5 →	+0.023	+5.415	<.001	.004	3	1

Each partner links to its Q-omics profile. Showing the 2 strongest of 2 associations by consensus.

MAGEB4 by LHFPL2 expression — LARGE_INTESTINE

Explore this box plot interactively →