LETMD1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LETMD1 RNA expression is significantly associated with the protein abundance of many other proteins, with 16,071 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible LETMD1-associated proteins across cancer lineages are DDX23, SART3, and MYG1. Each is linked with LETMD1 in more than 6 cancer types. Because this analysis shows association rather than direction, both LETMD1-to-partner and partner-to-LETMD1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LETMD1 versus DDX23 in LSCC, with a Pearson correlation of 0.64.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LETMD1→partner) and Y-score (partner→LETMD1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCDDX23 →+0.268+0.378<.001<.00137
LSCCSART3 →+0.245+0.421<.001<.00137
PDACMYG1 →+0.336+0.366<.001<.00136
OVP4HB →-0.411-0.632.001<.00135
BRCAUBTF →+0.252+0.402<.001.00135
LSCCCRYBG3_S931 →-0.623-0.410<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 16,071 associations by consensus.

LETMD1 vs DDX23 — LSCC

Per-sample scatter of LETMD1 vs DDX23 in LSCC (Pearson r = 0.64).

Explore this scatter interactively →

Exploration