LDLRAD4-AS1

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, LDLRAD4-AS1 RNA differs between tumor and matched normal tissue in 14 of 18 cancer types tested, making tumor–normal expression one of LDLRAD4-AS1’s most consistent transcriptional readouts.

The strongest signal is observed in lung squamous cell carcinoma (LUSC), where LDLRAD4-AS1 RNA is repressed in tumor relative to normal tissue. In most cancer types LDLRAD4-AS1 is over-expressed in tumor, although a few such as LUSC and THCA show the opposite, repressed pattern.

LUSC, THCA, and KIRP are the cancer types where LDLRAD4-AS1 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in LDLRAD4-AS1 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
LUSCAllII,III,IV−0.483<.0018view →
THCAAllII,III,IV−0.260<.0018view →
KIRPMaleAll−0.205.0038view →
HNSCMaleAll−0.073<.0018view →
COADAllII,III,IV−0.083<.0017view →
UCECAllIII,IV−0.475<.0016view →
LUADFemaleII,III,IV−0.459<.0016view →
KIRCAllII,III,IV−0.216.0015view →
BLCAAllAll−0.137.0055view →
READMaleAll−0.110.0025view →
KICHAllAll−0.620<.0014view →
LIHCAllII,III,IV−0.134.0053view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 12 strongest of 14 lineages.

LDLRAD4-AS1–LUSC

Tumor-vs-normal expression box plot for LDLRAD4-AS1 RNA in LUSC.

Open the LUSC breakdown →

Exploration