LDHB

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, LDHB RNA expression is significantly associated with the go_rna of many other GO terms, with 3,823 significant associations in total. CNS shows the largest number of these associations.

The most reproducible LDHB-associated GO terms across cancer lineages are 'de novo' IMP biosynthetic process, Ribosomal small subunit biogenesis, and rRNA processing. Each is linked with LDHB in more than 13 cancer types. Because this analysis shows association rather than direction, both LDHB-to-partner and partner-to-LDHB results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, 'de novo' IMP biosynthetic process grouped by LDHB-low versus LDHB-high in BONE.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LDHB→partner) and Y-score (partner→LDHB) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BONE'de novo' IMP biosynthetic process →+0.157+0.967.004.007314
BONERibosomal small subunit biogenesis →+0.162+1.115<.001<.001314
BONErRNA processing →+0.154+1.203<.001<.001312
BONERibosome biogenesis →+0.147+0.971<.001.003312
BLOOD_LymphomaRibosome assembly →+0.094+0.763<.001<.001312
BONErRNA metabolic process →+0.133+0.804<.001.002212
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,823 associations by consensus.

'de novo' IMP biosynthetic process by LDHB expression — BONE

Box plot of 'de novo' IMP biosynthetic process in LDHB-low vs LDHB-high samples in BONE.

Explore this box plot interactively →

Exploration