LDB1

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, LDB1 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,898 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible LDB1-associated GO terms across cancer lineages are Viral translational termination-reinitiation, Positive regulation of intracellular steroid hormone receptor signaling pathway, and Regulation of sister chromatid cohesion. Each is linked with LDB1 in more than 15 cancer types. Because this analysis shows association rather than direction, both LDB1-to-partner and partner-to-LDB1 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LDB1→partner) and Y-score (partner→LDB1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_SCLCViral translational termination-reinitiation →+0.101+0.971<.001<.001316
BREASTPositive regulation of intracellular steroid hormone receptor signaling pathway →+0.154+1.227<.001<.001315
SOFT_TISSUERegulation of sister chromatid cohesion →+0.117+0.741<.001.004314
SOFT_TISSUERegulation of smoothened signaling pathway →+0.053+1.177<.001<.001314
STOMACHPre-mRNA catabolic process →+0.168+1.172<.001.002215
BONERegulation of double-strand break repair →+0.070+0.922.001.005314
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,898 associations by consensus.

Exploration