LCN15

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LCN15 protein abundance is significantly associated with the RNA expression of many other genes, with 103 significant associations in total. COAD shows the largest number of these associations.

The most reproducible LCN15-associated genes across cancer lineages are LMX1B, ZNF233, and CNTNAP2. Each is linked with LCN15 in more than 1 cancer types. Because this analysis shows association rather than direction, both LCN15-to-partner and partner-to-LCN15 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LCN15 versus LMX1B in COAD, with a Pearson correlation of 0.92.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LCN15→partner) and Y-score (partner→LCN15) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADLMX1B →+0.223+2.620.005<.00131
COADZNF233 →+0.911+2.544.004.00231
COADCNTNAP2 →-1.425-2.237.002.00831
COADCCDC75P1 →+0.246+2.518<.001<.00131
COADMGAT4EP →+0.093+2.713<.001<.00131
COADP2RX2 →+0.165+1.834.004.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 103 associations by consensus.

LCN15 vs LMX1B — COAD

Per-sample scatter of LCN15 vs LMX1B in COAD (Pearson r = 0.92).

Explore this scatter interactively →

Exploration