LCMT2

Across TCGA patient cohorts, LCMT2 RNA expression is significantly associated with the protein abundance of many other proteins, with 16,746 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible LCMT2-associated proteins across cancer lineages are SRP9, RTF1, and UBR1. Each is linked with LCMT2 in more than 7 cancer types. Because this analysis shows association rather than direction, both LCMT2-to-partner and partner-to-LCMT2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LCMT2 versus SRP9 in BRCA, with a Pearson correlation of 0.44.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LCMT2→partner) and Y-score (partner→LCMT2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	SRP9 →	+0.350	+0.518	<.001	<.001	3	8
LSCC	RTF1 →	+0.363	+0.597	<.001	<.001	3	7
BRCA	UBR1 →	+0.265	+0.484	<.001	<.001	3	6
GBM	CTDSPL2 →	+0.408	+0.386	<.001	<.001	3	6
OV	DNAJC17 →	+0.399	+0.561	<.001	<.001	3	6
LSCC	MYEF2 →	+0.779	+0.471	.001	<.001	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest of 16,746 associations by consensus.

LCMT2 vs SRP9 — BRCA

Explore this scatter interactively →