Across TCGA patient cohorts, LCMT1 RNA expression is significantly associated with the protein abundance of many other proteins, with 9,779 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible LCMT1-associated proteins across cancer lineages are UBFD1, PARN, and THUMPD1. Each is linked with LCMT1 in more than 7 cancer types. Because this analysis shows association rather than direction, both LCMT1-to-partner and partner-to-LCMT1 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LCMT1→partner) and Y-score (partner→LCMT1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	UBFD1 →	+0.283	+0.536	<.001	<.001	3	8
LUAD	PARN →	+0.279	+0.383	<.001	<.001	3	7
OV	THUMPD1 →	+0.433	+0.546	.002	<.001	3	6
BRCA	JPT2 →	+0.312	+0.383	<.001	<.001	3	5
OV	USP7 →	+0.310	+0.696	<.001	<.001	3	5
LSCC	GTF3C1 →	+0.287	+0.399	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 9,779 associations by consensus.

Exploration

LCMT1 survival (RNA) · tumor vs normal (RNA) · all LCMT1 data types