LCEP2

Across TCGA patient cohorts, LCEP2 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,672 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LCEP2-associated GO terms across cancer lineages are Ear morphogenesis, Carbohydrate biosynthetic process, and Obsolete nuclear-transcribed mRNA catabolic process, exonucleolytic. Each is linked with LCEP2 in more than 4 cancer types. Because this analysis shows association rather than direction, both LCEP2-to-partner and partner-to-LCEP2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Ear morphogenesis grouped by LCEP2-low versus LCEP2-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LCEP2→partner) and Y-score (partner→LCEP2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Ear morphogenesis →	+0.067	+0.042	<.001	<.001	3	5
STAD	Carbohydrate biosynthetic process →	+0.147	+0.046	<.001	<.001	3	4
STAD	Obsolete nuclear-transcribed mRNA catabolic process, exonucleolytic →	+0.188	+0.039	<.001	<.001	3	4
STAD	Obsolete nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' →	+0.156	+0.040	<.001	<.001	3	4
STAD	Nucleoside phosphate biosynthetic process →	+0.192	+0.042	<.001	<.001	3	4
STAD	Negative regulation of mRNA metabolic process →	+0.191	+0.044	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,672 associations by consensus.

Ear morphogenesis by LCEP2 expression — STAD

Explore this box plot interactively →