LCE6A

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, LCE6A RNA differs between tumor and matched normal tissue in 2 of 18 cancer types tested, making tumor–normal expression one of LCE6A’s most consistent transcriptional readouts.

The strongest signal is observed in lung squamous cell carcinoma (LUSC), where LCE6A RNA is more highly expressed in tumor relative to normal tissue. In most cancer types LCE6A is over-expressed in tumor, although a few such as THCA show the opposite, repressed pattern.

LUSC and THCA are the cancer types where LCE6A tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in LCE6A RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
LUSCAllAll+0.040.0063view →
THCAAllAll−0.011.0471view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 2 strongest of 2 lineages.

LCE6A–LUSC

Tumor-vs-normal expression box plot for LCE6A RNA in LUSC.

Open the LUSC breakdown →

Exploration