LCE4A

RNA expression — cross-omics
Cross-omicsRNA → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LCE4A RNA expression is significantly associated with the RNA expression of many other genes, with 3,503 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible LCE4A-associated genes across cancer lineages are LCE2D, LCE2A, and LCE2C. Each is linked with LCE4A in more than 13 cancer types. Because this analysis shows association rather than direction, both LCE4A-to-partner and partner-to-LCE4A results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LCE4A→partner) and Y-score (partner→LCE4A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCLCE2D →+2.675+0.073<.001<.001314
HNSCLCE2A →+3.179+0.071<.001<.001313
HNSCLCE2C →+3.220+0.074<.001<.001312
HNSCLCE1F →+2.921+0.072<.001<.00139
SARCLCEP4 →+1.498+0.102<.001<.00139
HNSCLCE2B →+3.369+0.070<.001<.00139
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,503 associations by consensus.

Exploration