LARS2

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, LARS2 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,399 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible LARS2-associated GO terms across cancer lineages are Nucleosome disassembly, rRNA 5'-end processing, and Amino acid activation. Each is linked with LARS2 in more than 17 cancer types. Because this analysis shows association rather than direction, both LARS2-to-partner and partner-to-LARS2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Nucleosome disassembly grouped by LARS2-low versus LARS2-high in OVARY.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LARS2→partner) and Y-score (partner→LARS2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVARYNucleosome disassembly →+0.158+0.985<.001<.001318
LIVERrRNA 5'-end processing →+0.132+0.609<.001<.001316
LIVERAmino acid activation →+0.130+0.997<.001<.001316
LIVERtRNA aminoacylation →+0.130+0.997<.001<.001316
LIVEREndonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) →+0.132+0.609<.001<.001316
BONERegulation of translational fidelity →+0.133+0.783.001<.001316
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,399 associations by consensus.

Nucleosome disassembly by LARS2 expression — OVARY

Box plot of Nucleosome disassembly in LARS2-low vs LARS2-high samples in OVARY.

Explore this box plot interactively →

Exploration