LARS1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LARS1 protein abundance is significantly associated with the RNA expression of many other genes, with 20,981 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible LARS1-associated genes across cancer lineages are CARD8-AS1, MIR223HG, and FCGR2A. Each is linked with LARS1 in more than 6 cancer types. Because this analysis shows association rather than direction, both LARS1-to-partner and partner-to-LARS1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LARS1 versus CARD8-AS1 in UCEC, with a Pearson correlation of -0.32.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LARS1→partner) and Y-score (partner→LARS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCARD8-AS1 →-0.543-0.221.004.00137
HNSCMIR223HG →-0.828-0.189<.001.00237
COADFCGR2A →-0.939-0.240<.001<.00136
BRCACLEC1A →-0.610-0.262<.001<.00136
COADFLI1 →-0.658-0.216<.001<.00136
GBMPRKCB →-0.816-0.206<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 20,981 associations by consensus.

LARS1 vs CARD8-AS1 — UCEC

Per-sample scatter of LARS1 vs CARD8-AS1 in UCEC (Pearson r = -0.32).

Explore this scatter interactively →

Exploration