LAPTM5

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LAPTM5 mutation is significantly associated with the total protein of many other genes, with 9 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LAPTM5-associated genes across cancer lineages are 14-3-3_beta, Heregulin, and N-Cadherin. Each is linked with LAPTM5 in more than 1 cancer types. Because this analysis shows association rather than direction, both LAPTM5-to-partner and partner-to-LAPTM5 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, 14-3-3_beta grouped by LAPTM5-low versus LAPTM5-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LAPTM5→partner) and Y-score (partner→LAPTM5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCEC14-3-3_beta →-0.143-3.308.006.01031
UCECHeregulin →-0.140-3.169.030.01931
UCECN-Cadherin →-0.316-2.990.004.03631
UCECp27_pT157 →-0.065-2.960.032.03631
UCECp90 RSK →+0.218+3.009.029.01931
UCECPEA-15_pS116 →-0.406-3.321.027.01031
Each partner links to its Q-omics profile. Showing the 6 strongest of 9 associations by consensus.

14-3-3_beta by LAPTM5 expression — UCEC

Box plot of 14-3-3_beta in LAPTM5-low vs LAPTM5-high samples in UCEC.

Explore this box plot interactively →

Exploration