LAMC3

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LAMC3 mutation is significantly associated with the total protein of many other genes, with 63 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LAMC3-associated genes across cancer lineages are Caspase-7-cleavedD198, Cyclin-B1, and ERK2. Each is linked with LAMC3 in more than 4 cancer types. Because this analysis shows association rather than direction, both LAMC3-to-partner and partner-to-LAMC3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Caspase-7-cleavedD198 grouped by LAMC3-low versus LAMC3-high in COAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LAMC3→partner) and Y-score (partner→LAMC3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADCaspase-7-cleavedD198 →+1.009+2.717<.001.00235
UCECCyclin-B1 →+0.579+1.544<.001<.00134
UCECERK2 →+0.172+1.432<.001.00434
STADeEF2 →+0.369+3.321.002.00924
STADEGFR_pY1068 →-0.339-3.321.030.00933
STAD4E-BP1 →+0.393+3.584.001.00233
Each partner links to its Q-omics profile. Showing the 6 strongest of 63 associations by consensus.

Caspase-7-cleavedD198 by LAMC3 expression — COAD

Box plot of Caspase-7-cleavedD198 in LAMC3-low vs LAMC3-high samples in COAD.

Explore this box plot interactively →

Exploration