LAMC2

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LAMC2 protein abundance is significantly associated with the RNA expression of many other genes, with 9,716 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible LAMC2-associated genes across cancer lineages are AHNAK2, LAMB3, and GJB3. Each is linked with LAMC2 in more than 7 cancer types. Because this analysis shows association rather than direction, both LAMC2-to-partner and partner-to-LAMC2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LAMC2 versus AHNAK2 in UCEC, with a Pearson correlation of 0.45.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LAMC2→partner) and Y-score (partner→LAMC2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECAHNAK2 →+1.672+0.888<.001<.00138
BRCALAMB3 →+2.089+1.265<.001<.00138
LUADGJB3 →+1.115+0.854<.001<.00137
BRCAS100A10 →+0.982+0.791<.001<.00137
HNSCCAV2 →+0.982+0.852<.001.00136
UCECPLAUR →+0.991+0.652<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,716 associations by consensus.

LAMC2 vs AHNAK2 — UCEC

Per-sample scatter of LAMC2 vs AHNAK2 in UCEC (Pearson r = 0.45).

Explore this scatter interactively →

Exploration