LAMA5

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, LAMA5 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,737 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible LAMA5-associated GO terms across cancer lineages are Regulation of myoblast fusion, Negative regulation of RNA catabolic process, and Protein stabilization. Each is linked with LAMA5 in more than 12 cancer types. Because this analysis shows association rather than direction, both LAMA5-to-partner and partner-to-LAMA5 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of myoblast fusion grouped by LAMA5-low versus LAMA5-high in KIDNEY.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LAMA5→partner) and Y-score (partner→LAMA5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
KIDNEYRegulation of myoblast fusion →+0.112+2.488<.001.004313
OESOPHAGUSNegative regulation of RNA catabolic process →+0.078+2.179.001.001313
STOMACHProtein stabilization →+0.081+2.570<.001.001312
KIDNEYNegative regulation of respiratory burst involved in inflammatory response →+0.159+3.246.002<.001312
KIDNEYNegative regulation of respiratory burst →+0.159+3.246.002<.001312
OESOPHAGUSNegative regulation of myoblast fusion →+0.115+1.830.003.002213
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,737 associations by consensus.

Regulation of myoblast fusion by LAMA5 expression — KIDNEY

Box plot of Regulation of myoblast fusion in LAMA5-low vs LAMA5-high samples in KIDNEY.

Explore this box plot interactively →

Exploration