LAMA5-AS1

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, LAMA5-AS1 RNA differs between tumor and matched normal tissue in 10 of 18 cancer types tested, making tumor–normal expression one of LAMA5-AS1’s most consistent transcriptional readouts.

The strongest signal is observed in kidney renal clear cell carcinoma (KIRC), where LAMA5-AS1 RNA is more highly expressed in tumor relative to normal tissue. In most cancer types LAMA5-AS1 is over-expressed in tumor, although a few such as THCA and KICH show the opposite, repressed pattern.

KIRC, THCA, and KICH are the cancer types where LAMA5-AS1 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in LAMA5-AS1 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
KIRCFemaleIV+1.758<.00112view →
THCAMaleIII,IV−1.452<.00111view →
KICHAllIV−0.360.0017view →
COADAllII,III,IV+0.205<.0015view →
CHOLAllII,III,IV−2.205<.0014view →
KIRPAllAll+0.432.0024view →
PRADAllAll−0.732<.0012view →
BRCAAllIII,IV−0.213.0102view →
LUADAllIII,IV−0.190.0282view →
LIHCFemaleII,III,IV−1.377.0221view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 10 strongest of 10 lineages.

Exploration