L3MBTL3

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, L3MBTL3 mutation is significantly associated with the RNA expression of many other genes, with 31 significant associations in total. SKIN shows the largest number of these associations.

The most reproducible L3MBTL3-associated genes across cancer lineages are ITGAD, C3orf22, and OR4F15. Each is linked with L3MBTL3 in more than 1 cancer types. Because this analysis shows association rather than direction, both L3MBTL3-to-partner and partner-to-L3MBTL3 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (L3MBTL3→partner) and Y-score (partner→L3MBTL3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEITGAD →+0.009+3.247.001.00132
URINARY_TRACTC3orf22 →+0.016+4.584<.001.00231
URINARY_TRACTOR4F15 →+0.138+4.217<.001.00531
URINARY_TRACTDCDC2C →+0.126+4.217<.001.00531
URINARY_TRACTGH1 →+0.067+4.584<.001.00231
URINARY_TRACTOTC →+0.031+4.217<.001.00531
Each partner links to its Q-omics profile. Showing the 6 strongest of 31 associations by consensus.

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