KSR2

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, KSR2 mutation is significantly associated with the RNA expression of many other genes, with 5,349 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible KSR2-associated genes across cancer lineages are CHAF1A, AUNIP, and EIF5A. Each is linked with KSR2 in more than 4 cancer types. Because this analysis shows association rather than direction, both KSR2-to-partner and partner-to-KSR2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CHAF1A grouped by KSR2-low versus KSR2-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KSR2→partner) and Y-score (partner→KSR2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCHAF1A →+0.524+1.794<.001<.00135
UCECAUNIP →+0.474+1.592<.001.00135
STADEIF5A →+0.628+3.840<.001<.00135
UCECFCER1A →-0.732-1.932<.001<.00135
UCECWDHD1 →+0.429+2.091.001<.00135
UCECCENPU →+0.487+1.628<.001.00434
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,349 associations by consensus.

CHAF1A by KSR2 expression — UCEC

Box plot of CHAF1A in KSR2-low vs KSR2-high samples in UCEC.

Explore this box plot interactively →

Exploration