KRT19

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, KRT19 mutation is significantly associated with the RNA expression of many other genes, with 1,261 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible KRT19-associated genes across cancer lineages are KIAA1841, SNX11, and SARM1. Each is linked with KRT19 in more than 1 cancer types. Because this analysis shows association rather than direction, both KRT19-to-partner and partner-to-KRT19 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, KIAA1841 grouped by KRT19-low versus KRT19-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KRT19→partner) and Y-score (partner→KRT19) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECKIAA1841 →+0.456+2.906.007.00232
UCECSNX11 →+0.383+4.053.001<.00132
UCECSARM1 →+0.484+3.202<.001.00932
UCECNSF →+0.580+3.716.001<.00132
UCECDLG3 →+0.513+3.475.002.00232
UCECRFFL →+0.563+2.243.002.00632
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,261 associations by consensus.

KIAA1841 by KRT19 expression — UCEC

Box plot of KIAA1841 in KRT19-low vs KRT19-high samples in UCEC.

Explore this box plot interactively →

Exploration