KLHL42

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, KLHL42 mutation is significantly associated with the RNA expression of many other genes, with 2 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible KLHL42-associated genes across cancer lineages are DCD and PROP1. Each is linked with KLHL42 in more than 1 cancer types. Because this analysis shows association rather than direction, both KLHL42-to-partner and partner-to-KLHL42 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, DCD grouped by KLHL42-low versus KLHL42-high in LUNG_SCLC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KLHL42→partner) and Y-score (partner→KLHL42) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_SCLCDCD →+1.446+5.643<.001.00231
BLOOD_LeukemiaPROP1 →+0.023+3.874.001.00531
Each partner links to its Q-omics profile. Showing the 2 strongest of 2 associations by consensus.

DCD by KLHL42 expression — LUNG_SCLC

Box plot of DCD in KLHL42-low vs KLHL42-high samples in LUNG_SCLC.

Explore this box plot interactively →

Exploration