KLHL21

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, KLHL21 mutation is significantly associated with the RNA expression of many other genes, with 15 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible KLHL21-associated genes across cancer lineages are LRRC10, OR1L3, and DYTN. Each is linked with KLHL21 in more than 1 cancer types. Because this analysis shows association rather than direction, both KLHL21-to-partner and partner-to-KLHL21 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, LRRC10 grouped by KLHL21-low versus KLHL21-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KLHL21→partner) and Y-score (partner→KLHL21) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINELRRC10 →+0.018+3.688<.001.00232
SKINOR1L3 →+0.022+4.415<.001.00731
SKINDYTN →+0.107+5.217<.001<.00131
BLOOD_LeukemiaADAM30 →+0.013+4.984<.001.00231
BLOOD_LeukemiaVWC2 →+0.307+3.551.008.00931
BLOOD_LeukemiaSLC6A17 →+0.205+4.037<.001.00431
Each partner links to its Q-omics profile. Showing the 6 strongest of 15 associations by consensus.

LRRC10 by KLHL21 expression — LARGE_INTESTINE

Box plot of LRRC10 in KLHL21-low vs KLHL21-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration