KLHDC7A

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, KLHDC7A mutation is significantly associated with the RNA expression of many other genes, with 89 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible KLHDC7A-associated genes across cancer lineages are HAO2, OR51B6, and OR1G1. Each is linked with KLHDC7A in more than 1 cancer types. Because this analysis shows association rather than direction, both KLHDC7A-to-partner and partner-to-KLHDC7A results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, HAO2 grouped by KLHDC7A-low versus KLHDC7A-high in OESOPHAGUS.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KLHDC7A→partner) and Y-score (partner→KLHDC7A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OESOPHAGUSHAO2 →+0.067+4.017<.001.00732
OESOPHAGUSOR51B6 →+0.270+4.017<.001.00732
OESOPHAGUSOR1G1 →+0.046+4.392<.001.00332
LUNG_NSCLC_LUADOR51B2 →+0.264+4.179.004.00132
LUNG_SCLCOR10Q1 →+0.653+5.643<.001.00232
OESOPHAGUSRTP2 →+0.017+4.017.001.00731
Each partner links to its Q-omics profile. Showing the 6 strongest of 89 associations by consensus.

HAO2 by KLHDC7A expression — OESOPHAGUS

Box plot of HAO2 in KLHDC7A-low vs KLHDC7A-high samples in OESOPHAGUS.

Explore this box plot interactively →

Exploration