KLHDC3

mutation — cross-omics
Cross-omicsMUTATION → IMMUNEPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, KLHDC3 mutation is significantly associated with the immune_cell of many other genes, with 5 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible KLHDC3-associated genes across cancer lineages are CD8+ Tcm, MPP, and MSC. Each is linked with KLHDC3 in more than 1 cancer types. Because this analysis shows association rather than direction, both KLHDC3-to-partner and partner-to-KLHDC3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CD8+ Tcm grouped by KLHDC3-low versus KLHDC3-high in CESC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KLHDC3→partner) and Y-score (partner→KLHDC3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CESCCD8+ Tcm →+0.067+3.918.045.03632
LIHCMPP →+0.023+3.282.048.04231
UCECMSC →-0.238-2.989.014.03531
UCECaDC →+0.068+2.815.047.03621
UCECPlasma cells →-0.023-2.542.020.01111
Each partner links to its Q-omics profile. Showing the 5 strongest of 5 associations by consensus.

CD8+ Tcm by KLHDC3 expression — CESC

Box plot of CD8+ Tcm in KLHDC3-low vs KLHDC3-high samples in CESC.

Explore this box plot interactively →

Exploration