KLC3

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, KLC3 mutation is significantly associated with the total protein of many other genes, with 17 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible KLC3-associated genes across cancer lineages are Annexin-1, VEGFR2, and 4E-BP1. Each is linked with KLC3 in more than 1 cancer types. Because this analysis shows association rather than direction, both KLC3-to-partner and partner-to-KLC3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Annexin-1 grouped by KLC3-low versus KLC3-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KLC3→partner) and Y-score (partner→KLC3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECAnnexin-1 →+0.611+2.000.010.03232
UCECVEGFR2 →+0.407+2.013.002.01832
UCEC4E-BP1 →+0.385+2.700.001.00632
UCECeIF4E →+0.232+3.013.014.01831
UCECA-Raf_pS299 →-0.184-2.000<.001.03231
UCECMyosin-IIa_pS1943 →+0.202+2.713.029.00331
Each partner links to its Q-omics profile. Showing the 6 strongest of 17 associations by consensus.

Annexin-1 by KLC3 expression — UCEC

Box plot of Annexin-1 in KLC3-low vs KLC3-high samples in UCEC.

Explore this box plot interactively →

Exploration