KLC1

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, KLC1 RNA differs between tumor and matched normal tissue in 9 of 18 cancer types tested, making tumor–normal expression one of KLC1’s most consistent transcriptional readouts.

The strongest signal is observed in head and neck squamous cell carcinoma (HNSC), where KLC1 RNA is more highly expressed in tumor relative to normal tissue. In most cancer types KLC1 is over-expressed in tumor, although a few such as BRCA and LUAD show the opposite, repressed pattern.

HNSC, LIHC, and COAD are the cancer types where KLC1 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in KLC1 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
HNSCFemaleAll+0.515<.00111view →
LIHCAllII,III,IV+0.580<.0019view →
COADFemaleAll+0.390<.0017view →
BRCAFemaleAll−0.286<.0016view →
CHOLMaleAll+1.726<.0015view →
LUADAllAll−0.314.0023view →
KICHAllAll−0.397.0032view →
READMaleAll+0.346.0332view →
KIRCAllAll+0.173.0142view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 9 strongest of 9 lineages.

KLC1–HNSC

Tumor-vs-normal expression box plot for KLC1 RNA in HNSC.

Open the HNSC breakdown →

Exploration