KL

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, KL protein abundance is significantly associated with the RNA expression of many other genes, with 3,301 significant associations in total. PDAC shows the largest number of these associations.

The most reproducible KL-associated genes across cancer lineages are CXCR1, CEACAM3, and NSUN3. Each is linked with KL in more than 2 cancer types. Because this analysis shows association rather than direction, both KL-to-partner and partner-to-KL results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, KL versus CXCR1 in GBM, with a Pearson correlation of 0.66.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KL→partner) and Y-score (partner→KL) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMCXCR1 →+1.922+2.535<.001<.00133
UCECCEACAM3 →+0.821+2.086.002<.00133
GBMNSUN3 →-0.508-2.140.003.00333
GBMMEFV →+0.936+1.653.003.00432
GBMAQP9 →+1.730+1.832.004.00232
PDACFFAR2 →+0.937+1.010<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,301 associations by consensus.

KL vs CXCR1 — GBM

Per-sample scatter of KL vs CXCR1 in GBM (Pearson r = 0.66).

Explore this scatter interactively →

Exploration