KCNK2

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, KCNK2 mutation is significantly associated with the total protein of many other genes, with 36 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible KCNK2-associated genes across cancer lineages are ATM, 4E-BP1_pT37_T46, and Cyclin-B1. Each is linked with KCNK2 in more than 1 cancer types. Because this analysis shows association rather than direction, both KCNK2-to-partner and partner-to-KCNK2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ATM grouped by KCNK2-low versus KCNK2-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KCNK2→partner) and Y-score (partner→KCNK2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECATM →-0.365-2.571.013.01032
UCEC4E-BP1_pT37_T46 →-0.271-1.986.026.02932
UCECCyclin-B1 →+0.452+1.807.013.02532
UCECDi-Ras3 →-0.117-2.571.014.01032
COADCaspase-7-cleavedD198 →+1.208+2.824.003.03432
COADChk1_pS345 →+0.192+2.824<.001.03432
Each partner links to its Q-omics profile. Showing the 6 strongest of 36 associations by consensus.

ATM by KCNK2 expression — UCEC

Box plot of ATM in KCNK2-low vs KCNK2-high samples in UCEC.

Explore this box plot interactively →

Exploration