KCNJ9

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, KCNJ9 protein abundance is significantly associated with the RNA expression of many other genes, with 89 significant associations in total. GBM shows the largest number of these associations.

The most reproducible KCNJ9-associated genes across cancer lineages are CLC, CD207, and APOBEC3A. Each is linked with KCNJ9 in more than 1 cancer types. Because this analysis shows association rather than direction, both KCNJ9-to-partner and partner-to-KCNJ9 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, KCNJ9 versus CLC in GBM, with a Pearson correlation of 0.73.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KCNJ9→partner) and Y-score (partner→KCNJ9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMCLC →+0.669+1.582.001.00331
GBMCD207 →-1.286-2.063<.001.00531
GBMAPOBEC3A →+1.403+2.064.001.00231
GBMADCY4 →+0.796+2.063.001.00531
GBMCEMIP2 →+1.186+2.068.005.00431
GBMGLS2 →-0.621-1.938<.001.00831
Each partner links to its Q-omics profile. Showing the 6 strongest of 89 associations by consensus.

KCNJ9 vs CLC — GBM

Per-sample scatter of KCNJ9 vs CLC in GBM (Pearson r = 0.73).

Explore this scatter interactively →

Exploration