KCNJ2

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, KCNJ2 mutation is significantly associated with the RNA expression of many other genes, with 6 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible KCNJ2-associated genes across cancer lineages are DEFB108B, GUCA2A, and TBC1D21. Each is linked with KCNJ2 in more than 1 cancer types. Because this analysis shows association rather than direction, both KCNJ2-to-partner and partner-to-KCNJ2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, DEFB108B grouped by KCNJ2-low versus KCNJ2-high in BLOOD_Leukemia.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KCNJ2→partner) and Y-score (partner→KCNJ2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaDEFB108B →+0.129+4.269<.001.00231
BLOOD_LeukemiaGUCA2A →+0.031+4.384<.001.00631
LARGE_INTESTINETBC1D21 →+0.010+4.022<.001.00631
LARGE_INTESTINEWDR87 →+0.025+4.353<.001.00131
LARGE_INTESTINEOR4F4 →+0.023+3.688<.001.00231
LARGE_INTESTINEKRT73 →+0.076+4.518<.001<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 6 associations by consensus.

DEFB108B by KCNJ2 expression — BLOOD_Leukemia

Box plot of DEFB108B in KCNJ2-low vs KCNJ2-high samples in BLOOD_Leukemia.

Explore this box plot interactively →

Exploration