KCNJ12

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, KCNJ12 mutation is significantly associated with the RNA expression of many other genes, with 283 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible KCNJ12-associated genes across cancer lineages are OR8B8, C1orf94, and KRTAP2-1. Each is linked with KCNJ12 in more than 1 cancer types. Because this analysis shows association rather than direction, both KCNJ12-to-partner and partner-to-KCNJ12 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KCNJ12→partner) and Y-score (partner→KCNJ12) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_NSCLC_LUADOR8B8 →+0.016+2.827<.001.00432
LUNG_NSCLC_LUSCC1orf94 →+0.018+2.552.008.00831
LUNG_NSCLC_LUSCKRTAP2-1 →+0.049+2.552.006.00831
OESOPHAGUSMARCHF11 →+0.207+3.836.001.00431
LUNG_SCLCOR9G4 →+0.119+5.029<.001.00631
LUNG_SCLCDEFB123 →+0.103+5.643<.001.00231
Each partner links to its Q-omics profile. Showing the 6 strongest of 283 associations by consensus.

Exploration