Across TCGA cell cohorts, KCNIP4 mutation is significantly associated with the RNA expression of many other genes, with 4 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible KCNIP4-associated genes across cancer lineages are PRAMEF9, LCE1F, and OR12D2. Each is linked with KCNIP4 in more than 1 cancer types. Because this analysis shows association rather than direction, both KCNIP4-to-partner and partner-to-KCNIP4 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KCNIP4→partner) and Y-score (partner→KCNIP4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LARGE_INTESTINE	PRAMEF9 →	+0.005	+5.022	<.001	.002	3	1
LARGE_INTESTINE	LCE1F →	+0.122	+4.415	<.001	.007	3	1
LARGE_INTESTINE	OR12D2 →	+0.082	+4.467	<.001	.004	3	1
SKIN	SI →	+0.006	+4.977	<.001	.007	3	1

Each partner links to its Q-omics profile. Showing the 4 strongest of 4 associations by consensus.

Exploration

KCNIP4 survival (RNA) · tumor vs normal (RNA) · all KCNIP4 data types