KCNIP3

Across TCGA patient cohorts, KCNIP3 protein abundance is significantly associated with the RNA expression of many other genes, with 5,048 significant associations in total. GBM shows the largest number of these associations.

The most reproducible KCNIP3-associated genes across cancer lineages are SULT4A1, ELFN2, and GINS3. Each is linked with KCNIP3 in more than 1 cancer types. Because this analysis shows association rather than direction, both KCNIP3-to-partner and partner-to-KCNIP3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, KCNIP3 versus SULT4A1 in CCRCC, with a Pearson correlation of 0.92.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KCNIP3→partner) and Y-score (partner→KCNIP3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
CCRCC	SULT4A1 →	+2.235	+0.766	<.001	<.001	3	2
GBM	ELFN2 →	+1.457	+0.790	<.001	<.001	3	2
GBM	GINS3 →	+0.535	+0.520	.001	.008	3	2
CCRCC	SMAD7 →	-0.713	-0.766	.001	<.001	3	1
CCRCC	FSCN3 →	-0.282	-0.875	.002	.001	3	1
CCRCC	DNM1 →	-2.220	-0.817	.002	<.001	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,048 associations by consensus.

KCNIP3 vs SULT4A1 — CCRCC

Explore this scatter interactively →