KCNH6

RNA expression — cross-omics
Cross-omicsRNA → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, KCNH6 RNA expression is significantly associated with the RNA expression of many other genes, with 11,878 significant associations in total. TGCT shows the largest number of these associations.

The most reproducible KCNH6-associated genes across cancer lineages are KCNH2, RIMKLA, and VWA5B2. Each is linked with KCNH6 in more than 21 cancer types. Because this analysis shows association rather than direction, both KCNH6-to-partner and partner-to-KCNH6 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, KCNH6 versus KCNH2 in SARC, with a Pearson correlation of 0.19.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KCNH6→partner) and Y-score (partner→KCNH6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SARCKCNH2 →+1.493+0.049<.001.002322
SCLCRIMKLA →+1.271+1.640<.001<.001321
PAADVWA5B2 →+2.172+1.885<.001<.001321
SCLCSCN8A →+1.389+1.350<.001<.001320
PAADSCAMP5 →+1.108+1.503<.001<.001320
PAADSCGN →+3.687+1.854<.001<.001320
Each partner links to its Q-omics profile. Showing the 6 strongest of 11,878 associations by consensus.

KCNH6 vs KCNH2 — SARC

Per-sample scatter of KCNH6 vs KCNH2 in SARC (Pearson r = 0.19).

Explore this scatter interactively →

Exploration