KCND2

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, KCND2 mutation is significantly associated with the RNA expression of many other genes, with 4,475 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible KCND2-associated genes across cancer lineages are ZWINT, PARPBP, and RFC5. Each is linked with KCND2 in more than 4 cancer types. Because this analysis shows association rather than direction, both KCND2-to-partner and partner-to-KCND2 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KCND2→partner) and Y-score (partner→KCND2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECZWINT →+0.600+1.666<.001<.00135
SKCMPARPBP →+0.422+1.661.001.00435
COADRFC5 →+0.432+2.249.001.00625
UCECCENPU →+0.516+1.202<.001.00334
UCECEIF2S1 →+0.424+1.595<.001.00134
UCECNUSAP1 →+0.561+1.302<.001.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,475 associations by consensus.

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