KCND1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, KCND1 protein abundance is significantly associated with the RNA expression of many other genes, with 2,986 significant associations in total. GBM shows the largest number of these associations.

The most reproducible KCND1-associated genes across cancer lineages are FOXRED2, CDKN3, and UQCC1. Each is linked with KCND1 in more than 1 cancer types. Because this analysis shows association rather than direction, both KCND1-to-partner and partner-to-KCND1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, KCND1 versus FOXRED2 in UCEC, with a Pearson correlation of -0.49.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KCND1→partner) and Y-score (partner→KCND1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECFOXRED2 →-1.468-0.618.006.00231
UCECCDKN3 →-1.909-0.929.009.00131
UCECUQCC1 →-0.686-0.745.003<.00131
UCECCENPI →-1.868-0.890.008.00131
UCECMCM4 →-1.380-0.814.002.00731
UCECGPI →-0.732-0.754.008<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,986 associations by consensus.

KCND1 vs FOXRED2 — UCEC

Per-sample scatter of KCND1 vs FOXRED2 in UCEC (Pearson r = -0.49).

Explore this scatter interactively →

Exploration