KCNC4

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, KCNC4 mutation is significantly associated with the total protein of many other genes, with 25 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible KCNC4-associated genes across cancer lineages are PCNA, Caspase-7-cleavedD198, and 14-3-3_beta. Each is linked with KCNC4 in more than 1 cancer types. Because this analysis shows association rather than direction, both KCNC4-to-partner and partner-to-KCNC4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, PCNA grouped by KCNC4-low versus KCNC4-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KCNC4→partner) and Y-score (partner→KCNC4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECPCNA →+0.185+1.514.011.01532
COADCaspase-7-cleavedD198 →+0.921+2.824.024.03432
UCEC14-3-3_beta →-0.079-1.234.021.04531
UCECEGFR →-0.133-1.848.014.04931
UCECeIF4E →+0.149+3.183.037.00931
UCECERK2 →+0.201+2.502.002.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 25 associations by consensus.

PCNA by KCNC4 expression — UCEC

Box plot of PCNA in KCNC4-low vs KCNC4-high samples in UCEC.

Explore this box plot interactively →

Exploration