KATNIP

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, KATNIP protein abundance is significantly associated with the RNA expression of many other genes, with 7,542 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible KATNIP-associated genes across cancer lineages are OSCP1, CAPSL, and DNAI4. Each is linked with KATNIP in more than 4 cancer types. Because this analysis shows association rather than direction, both KATNIP-to-partner and partner-to-KATNIP results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, KATNIP versus OSCP1 in UCEC, with a Pearson correlation of 0.54.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KATNIP→partner) and Y-score (partner→KATNIP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECOSCP1 →+0.831+0.257<.001<.00135
UCECCAPSL →+2.194+0.294<.001<.00135
UCECDNAI4 →+1.085+0.253<.001<.00135
UCECC9orf116 →+1.448+0.290<.001<.00135
BRCADNALI1 →+1.915+0.376<.001<.00135
UCECCCDC96 →+1.036+0.314<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,542 associations by consensus.

KATNIP vs OSCP1 — UCEC

Per-sample scatter of KATNIP vs OSCP1 in UCEC (Pearson r = 0.54).

Explore this scatter interactively →

Exploration