KATNAL1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, KATNAL1 mutation is significantly associated with the RNA expression of many other genes, with 2,488 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible KATNAL1-associated genes across cancer lineages are C9orf152, IGHD3-16, and RAD51AP2. Each is linked with KATNAL1 in more than 1 cancer types. Because this analysis shows association rather than direction, both KATNAL1-to-partner and partner-to-KATNAL1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, C9orf152 grouped by KATNAL1-low versus KATNAL1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KATNAL1→partner) and Y-score (partner→KATNAL1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECC9orf152 →+1.023+2.392.004<.00132
UCECIGHD3-16 →+1.049+2.211<.001<.00132
UCECRAD51AP2 →+0.131+1.924.006.00532
UCECIGHD4-17 →+0.674+2.299<.001.00432
UCECRNA5SP417 →+0.457+1.989<.001.00432
LUADRNA5SP109 →+0.447+6.197<.001.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,488 associations by consensus.

C9orf152 by KATNAL1 expression — UCEC

Box plot of C9orf152 in KATNAL1-low vs KATNAL1-high samples in UCEC.

Explore this box plot interactively →

Exploration