KASH5

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, KASH5 RNA expression is significantly associated with the go_rna of many other GO terms, with 1,908 significant associations in total. BONE shows the largest number of these associations.

The most reproducible KASH5-associated GO terms across cancer lineages are Chromosome localization to nuclear envelope involved in homologous chromosome segregation, Telomere localization, and Cell activation involved in immune response. Each is linked with KASH5 in more than 15 cancer types. Because this analysis shows association rather than direction, both KASH5-to-partner and partner-to-KASH5 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Chromosome localization to nuclear envelope involved in homologous chromosome segregation grouped by KASH5-low versus KASH5-high in BONE.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (KASH5→partner) and Y-score (partner→KASH5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BONEChromosome localization to nuclear envelope involved in homologous chromosome segregation →-0.314-1.975<.001<.001316
BLOOD_LeukemiaTelomere localization →-0.175-0.489<.001<.001310
BLOOD_LeukemiaCell activation involved in immune response →+0.052+0.448.002.00334
BLOOD_LeukemiaLeukocyte activation involved in immune response →+0.050+0.455.005.00234
OVARYRegulation of mesodermal cell fate specification →-1.126-0.486<.001.00634
BONESodium-dependent phosphate transport →+1.288+1.711.002.00234
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,908 associations by consensus.

Chromosome localization to nuclear envelope involved in homologous chromosome segregation by KASH5 expression — BONE

Box plot of Chromosome localization to nuclear envelope involved in homologous chromosome segregation in KASH5-low vs KASH5-high samples in BONE.

Explore this box plot interactively →

Exploration