JRKL

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, JRKL mutation is significantly associated with the RNA expression of many other genes, with 5,835 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible JRKL-associated genes across cancer lineages are RNA5SP411, OR10H3, and OR7E97P. Each is linked with JRKL in more than 2 cancer types. Because this analysis shows association rather than direction, both JRKL-to-partner and partner-to-JRKL results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (JRKL→partner) and Y-score (partner→JRKL) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRNA5SP411 →+0.763+1.677<.001<.00133
BLCAOR10H3 →+0.041+6.048<.001<.00133
BLCAOR7E97P →+0.042+4.704<.001.00533
LUSCKRTAP20-3 →+0.839+7.924<.001.00833
UCECLINC02084 →+0.363+2.169<.001<.00132
READPGBD4P2 →+0.162+6.257<.001.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,835 associations by consensus.

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